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spectrochip array  (agena bioscience)


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    agena bioscience spectrochip array
    Spectrochip Array, supplied by agena bioscience, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/spectrochip%C2%AE+array/spectrochip/pm40577992-87-11-13
    Average 90 stars, based on 1 article reviews
    spectrochip array - by Bioz Stars, 2026-09
    90/100 stars

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    Related Articles

    Blocking Assay:

    Article Title: Sensitive detection of mitochondrial DNA variants for analysis of mitochondrial DNA-enriched extracts from frozen tumor tissue
    Article Snippet: After capture of the extended primers using streptavidin-coated magnetic beads, a cation-exchange resin was added for cleaning and 10-15 nl of the reaction was transferred to a SpectroCHIP® Array (a silicon chip with pre-spotted matrix crystals) using an RS1000 Nanodispenser ( Agena Bioscience ).

    Article Title: Fine-mapping and cross-validation of QTLs linked to fatty acid composition in multiple independent interspecific crosses of oil palm
    Article Snippet: The extension reaction product was desalted using the SpectroCLEAN (Agena Bioscience, Inc. San Deigo, California) resin treatment and transferred onto the SpectroCHIP® Array (Agena Bioscience, Inc. San Deigo, California) for data analysis using Matrix-Assisted Laser Desorption/Ionization Time-Of-Flight (MALDI-TOF) mass spectrometry.

    Article Title: Programmed cell death-ligand 1 (PD-L1) expression is associated with RAS/TP53 mutations in lung adenocarcinoma.
    Article Snippet: Introduction: The systematic assessment of anti-programmed cell death ligand 1 (PD-L1) expression by immunohistochemistry (IHC) in lung adenocarcinomas is becoming standard practice.. However, the assessment of PD-L1 expression on small tissue specimens needs to be evaluated and the association with other features more thoroughly analyzed.. Methods: This retrospective single center study evaluated the immunohistochemical expression of the SP263 anti-PD-L1 antibody on tissue microarrays (TMA) of 152 surgically resected lung adenocarcinomas, using a 25% positivity threshold.

    Article Title: Sensitive detection of mitochondrial DNA variants for analysis of mitochondrial DNA-enriched extracts from frozen tumor tissue.
    Article Snippet: After capture of the extended primers using streptavidin-coated magnetic beads, a cation-exchange resin was added for cleaning and 10-15 nl of the reaction was transferred to a SpectroCHIP® Array (a silicon chip with pre-spotted matrix crystals) using an RS1000 Nanodispenser (Agena Bioscience).

    Article Title: Mutation analysis in individual circulating tumor cells depicts intratumor heterogeneity in melanoma.
    Article Snippet: Circulating tumor DNA (ctDNA) is the cornerstone of liquid biopsy diagnostics, revealing clinically relevant genomic aberrations from blood of cancer patients.. Genomic analysis of single circulating tumor cells (CTCs) could provide additional insights into intrapatient heterogeneity, but it requires whole-genome amplification (WGA) of DNA, which might introduce bias.. Here, we describe a novel approach based on mass spectrometry for mutation detection from individual CTCs not requiring WGA and complex bioinformatics pipelines.

    Article Title: NeoSeekTM STEC: A Multiplex Molecular Method for Detection and Identification of Select Shiga Toxin-Producing Escherichia coli in Beef.
    Article Snippet: Supplies and Equipment (a) Stomacher® or equivalent. (b) Balance.—2000 g capacity, 0.1 g sensitivity. (c) Incubator.—42 ± 1°C. (d) Heat block.—With insert for 1.5 mL microcentrifuge tubes, 100 ± 4°C. (e) PCR thermocycler. (f ) Microcentrifuge.—12 000 × g. (g) Plate centrifuge.—2000–4000 rpm. (h) Nanodispenser (Agena Bioscience). (i) SpectroCHIP® array.—384-element (Agena Bioscience). (j) Matrix-assisted laser desorption ionization-time-of-flight mass spectrometer.—MassARRAY Analyzer 4 system (Agena Bioscience). (k) PCR plates.—96- and 384-well. (l) Plate sealing film. (m) Microcentrifuge tubes.—1.5 mL. (n) Stomacher-type bags for sample enrichment.—With filters. (o) Serological pipettes.—1–10 mL. (p) Micropipettor and tips.—1–1000 μL. (q) STEC sample shipping kit.—For packaging and shipping samples for testing (Neogen Cat. No. 9287 or equivalent).

    Polymerase Chain Reaction:

    Article Title: Sensitive detection of mitochondrial DNA variants for analysis of mitochondrial DNA-enriched extracts from frozen tumor tissue
    Article Snippet: After capture of the extended primers using streptavidin-coated magnetic beads, a cation-exchange resin was added for cleaning and 10-15 nl of the reaction was transferred to a SpectroCHIP® Array (a silicon chip with pre-spotted matrix crystals) using an RS1000 Nanodispenser ( Agena Bioscience ).

    Article Title: Fine-mapping and cross-validation of QTLs linked to fatty acid composition in multiple independent interspecific crosses of oil palm
    Article Snippet: The extension reaction product was desalted using the SpectroCLEAN (Agena Bioscience, Inc. San Deigo, California) resin treatment and transferred onto the SpectroCHIP® Array (Agena Bioscience, Inc. San Deigo, California) for data analysis using Matrix-Assisted Laser Desorption/Ionization Time-Of-Flight (MALDI-TOF) mass spectrometry.

    Article Title: Programmed cell death-ligand 1 (PD-L1) expression is associated with RAS/TP53 mutations in lung adenocarcinoma.
    Article Snippet: Introduction: The systematic assessment of anti-programmed cell death ligand 1 (PD-L1) expression by immunohistochemistry (IHC) in lung adenocarcinomas is becoming standard practice.. However, the assessment of PD-L1 expression on small tissue specimens needs to be evaluated and the association with other features more thoroughly analyzed.. Methods: This retrospective single center study evaluated the immunohistochemical expression of the SP263 anti-PD-L1 antibody on tissue microarrays (TMA) of 152 surgically resected lung adenocarcinomas, using a 25% positivity threshold.

    Article Title: Sensitive detection of mitochondrial DNA variants for analysis of mitochondrial DNA-enriched extracts from frozen tumor tissue.
    Article Snippet: After capture of the extended primers using streptavidin-coated magnetic beads, a cation-exchange resin was added for cleaning and 10-15 nl of the reaction was transferred to a SpectroCHIP® Array (a silicon chip with pre-spotted matrix crystals) using an RS1000 Nanodispenser (Agena Bioscience).

    Article Title: Mutation analysis in individual circulating tumor cells depicts intratumor heterogeneity in melanoma.
    Article Snippet: Circulating tumor DNA (ctDNA) is the cornerstone of liquid biopsy diagnostics, revealing clinically relevant genomic aberrations from blood of cancer patients.. Genomic analysis of single circulating tumor cells (CTCs) could provide additional insights into intrapatient heterogeneity, but it requires whole-genome amplification (WGA) of DNA, which might introduce bias.. Here, we describe a novel approach based on mass spectrometry for mutation detection from individual CTCs not requiring WGA and complex bioinformatics pipelines.

    Article Title: NeoSeekTM STEC: A Multiplex Molecular Method for Detection and Identification of Select Shiga Toxin-Producing Escherichia coli in Beef.
    Article Snippet: Supplies and Equipment (a) Stomacher® or equivalent. (b) Balance.—2000 g capacity, 0.1 g sensitivity. (c) Incubator.—42 ± 1°C. (d) Heat block.—With insert for 1.5 mL microcentrifuge tubes, 100 ± 4°C. (e) PCR thermocycler. (f ) Microcentrifuge.—12 000 × g. (g) Plate centrifuge.—2000–4000 rpm. (h) Nanodispenser (Agena Bioscience). (i) SpectroCHIP® array.—384-element (Agena Bioscience). (j) Matrix-assisted laser desorption ionization-time-of-flight mass spectrometer.—MassARRAY Analyzer 4 system (Agena Bioscience). (k) PCR plates.—96- and 384-well. (l) Plate sealing film. (m) Microcentrifuge tubes.—1.5 mL. (n) Stomacher-type bags for sample enrichment.—With filters. (o) Serological pipettes.—1–10 mL. (p) Micropipettor and tips.—1–1000 μL. (q) STEC sample shipping kit.—For packaging and shipping samples for testing (Neogen Cat. No. 9287 or equivalent).

    Transferring:

    Article Title: Sensitive detection of mitochondrial DNA variants for analysis of mitochondrial DNA-enriched extracts from frozen tumor tissue
    Article Snippet: After capture of the extended primers using streptavidin-coated magnetic beads, a cation-exchange resin was added for cleaning and 10-15 nl of the reaction was transferred to a SpectroCHIP® Array (a silicon chip with pre-spotted matrix crystals) using an RS1000 Nanodispenser ( Agena Bioscience ).

    Article Title: Fine-mapping and cross-validation of QTLs linked to fatty acid composition in multiple independent interspecific crosses of oil palm
    Article Snippet: The extension reaction product was desalted using the SpectroCLEAN (Agena Bioscience, Inc. San Deigo, California) resin treatment and transferred onto the SpectroCHIP® Array (Agena Bioscience, Inc. San Deigo, California) for data analysis using Matrix-Assisted Laser Desorption/Ionization Time-Of-Flight (MALDI-TOF) mass spectrometry.

    Article Title: Programmed cell death-ligand 1 (PD-L1) expression is associated with RAS/TP53 mutations in lung adenocarcinoma.
    Article Snippet: Introduction: The systematic assessment of anti-programmed cell death ligand 1 (PD-L1) expression by immunohistochemistry (IHC) in lung adenocarcinomas is becoming standard practice.. However, the assessment of PD-L1 expression on small tissue specimens needs to be evaluated and the association with other features more thoroughly analyzed.. Methods: This retrospective single center study evaluated the immunohistochemical expression of the SP263 anti-PD-L1 antibody on tissue microarrays (TMA) of 152 surgically resected lung adenocarcinomas, using a 25% positivity threshold.

    Article Title: Sensitive detection of mitochondrial DNA variants for analysis of mitochondrial DNA-enriched extracts from frozen tumor tissue.
    Article Snippet: After capture of the extended primers using streptavidin-coated magnetic beads, a cation-exchange resin was added for cleaning and 10-15 nl of the reaction was transferred to a SpectroCHIP® Array (a silicon chip with pre-spotted matrix crystals) using an RS1000 Nanodispenser (Agena Bioscience).

    Article Title: Mutation analysis in individual circulating tumor cells depicts intratumor heterogeneity in melanoma.
    Article Snippet: Circulating tumor DNA (ctDNA) is the cornerstone of liquid biopsy diagnostics, revealing clinically relevant genomic aberrations from blood of cancer patients.. Genomic analysis of single circulating tumor cells (CTCs) could provide additional insights into intrapatient heterogeneity, but it requires whole-genome amplification (WGA) of DNA, which might introduce bias.. Here, we describe a novel approach based on mass spectrometry for mutation detection from individual CTCs not requiring WGA and complex bioinformatics pipelines.

    Article Title: NeoSeekTM STEC: A Multiplex Molecular Method for Detection and Identification of Select Shiga Toxin-Producing Escherichia coli in Beef.
    Article Snippet: Supplies and Equipment (a) Stomacher® or equivalent. (b) Balance.—2000 g capacity, 0.1 g sensitivity. (c) Incubator.—42 ± 1°C. (d) Heat block.—With insert for 1.5 mL microcentrifuge tubes, 100 ± 4°C. (e) PCR thermocycler. (f ) Microcentrifuge.—12 000 × g. (g) Plate centrifuge.—2000–4000 rpm. (h) Nanodispenser (Agena Bioscience). (i) SpectroCHIP® array.—384-element (Agena Bioscience). (j) Matrix-assisted laser desorption ionization-time-of-flight mass spectrometer.—MassARRAY Analyzer 4 system (Agena Bioscience). (k) PCR plates.—96- and 384-well. (l) Plate sealing film. (m) Microcentrifuge tubes.—1.5 mL. (n) Stomacher-type bags for sample enrichment.—With filters. (o) Serological pipettes.—1–10 mL. (p) Micropipettor and tips.—1–1000 μL. (q) STEC sample shipping kit.—For packaging and shipping samples for testing (Neogen Cat. No. 9287 or equivalent).

    Mass Spectrometry:

    Article Title: Sensitive detection of mitochondrial DNA variants for analysis of mitochondrial DNA-enriched extracts from frozen tumor tissue
    Article Snippet: After capture of the extended primers using streptavidin-coated magnetic beads, a cation-exchange resin was added for cleaning and 10-15 nl of the reaction was transferred to a SpectroCHIP® Array (a silicon chip with pre-spotted matrix crystals) using an RS1000 Nanodispenser ( Agena Bioscience ).

    Article Title: Fine-mapping and cross-validation of QTLs linked to fatty acid composition in multiple independent interspecific crosses of oil palm
    Article Snippet: The extension reaction product was desalted using the SpectroCLEAN (Agena Bioscience, Inc. San Deigo, California) resin treatment and transferred onto the SpectroCHIP® Array (Agena Bioscience, Inc. San Deigo, California) for data analysis using Matrix-Assisted Laser Desorption/Ionization Time-Of-Flight (MALDI-TOF) mass spectrometry.

    Article Title: Programmed cell death-ligand 1 (PD-L1) expression is associated with RAS/TP53 mutations in lung adenocarcinoma.
    Article Snippet: Introduction: The systematic assessment of anti-programmed cell death ligand 1 (PD-L1) expression by immunohistochemistry (IHC) in lung adenocarcinomas is becoming standard practice.. However, the assessment of PD-L1 expression on small tissue specimens needs to be evaluated and the association with other features more thoroughly analyzed.. Methods: This retrospective single center study evaluated the immunohistochemical expression of the SP263 anti-PD-L1 antibody on tissue microarrays (TMA) of 152 surgically resected lung adenocarcinomas, using a 25% positivity threshold.

    Article Title: Sensitive detection of mitochondrial DNA variants for analysis of mitochondrial DNA-enriched extracts from frozen tumor tissue.
    Article Snippet: After capture of the extended primers using streptavidin-coated magnetic beads, a cation-exchange resin was added for cleaning and 10-15 nl of the reaction was transferred to a SpectroCHIP® Array (a silicon chip with pre-spotted matrix crystals) using an RS1000 Nanodispenser (Agena Bioscience).

    Article Title: Mutation analysis in individual circulating tumor cells depicts intratumor heterogeneity in melanoma.
    Article Snippet: Circulating tumor DNA (ctDNA) is the cornerstone of liquid biopsy diagnostics, revealing clinically relevant genomic aberrations from blood of cancer patients.. Genomic analysis of single circulating tumor cells (CTCs) could provide additional insights into intrapatient heterogeneity, but it requires whole-genome amplification (WGA) of DNA, which might introduce bias.. Here, we describe a novel approach based on mass spectrometry for mutation detection from individual CTCs not requiring WGA and complex bioinformatics pipelines.

    Article Title: NeoSeekTM STEC: A Multiplex Molecular Method for Detection and Identification of Select Shiga Toxin-Producing Escherichia coli in Beef.
    Article Snippet: Supplies and Equipment (a) Stomacher® or equivalent. (b) Balance.—2000 g capacity, 0.1 g sensitivity. (c) Incubator.—42 ± 1°C. (d) Heat block.—With insert for 1.5 mL microcentrifuge tubes, 100 ± 4°C. (e) PCR thermocycler. (f ) Microcentrifuge.—12 000 × g. (g) Plate centrifuge.—2000–4000 rpm. (h) Nanodispenser (Agena Bioscience). (i) SpectroCHIP® array.—384-element (Agena Bioscience). (j) Matrix-assisted laser desorption ionization-time-of-flight mass spectrometer.—MassARRAY Analyzer 4 system (Agena Bioscience). (k) PCR plates.—96- and 384-well. (l) Plate sealing film. (m) Microcentrifuge tubes.—1.5 mL. (n) Stomacher-type bags for sample enrichment.—With filters. (o) Serological pipettes.—1–10 mL. (p) Micropipettor and tips.—1–1000 μL. (q) STEC sample shipping kit.—For packaging and shipping samples for testing (Neogen Cat. No. 9287 or equivalent).

    Software:

    Article Title: Sensitive detection of mitochondrial DNA variants for analysis of mitochondrial DNA-enriched extracts from frozen tumor tissue
    Article Snippet: After capture of the extended primers using streptavidin-coated magnetic beads, a cation-exchange resin was added for cleaning and 10-15 nl of the reaction was transferred to a SpectroCHIP® Array (a silicon chip with pre-spotted matrix crystals) using an RS1000 Nanodispenser ( Agena Bioscience ).

    Article Title: Fine-mapping and cross-validation of QTLs linked to fatty acid composition in multiple independent interspecific crosses of oil palm
    Article Snippet: The extension reaction product was desalted using the SpectroCLEAN (Agena Bioscience, Inc. San Deigo, California) resin treatment and transferred onto the SpectroCHIP® Array (Agena Bioscience, Inc. San Deigo, California) for data analysis using Matrix-Assisted Laser Desorption/Ionization Time-Of-Flight (MALDI-TOF) mass spectrometry.

    Article Title: Programmed cell death-ligand 1 (PD-L1) expression is associated with RAS/TP53 mutations in lung adenocarcinoma.
    Article Snippet: Introduction: The systematic assessment of anti-programmed cell death ligand 1 (PD-L1) expression by immunohistochemistry (IHC) in lung adenocarcinomas is becoming standard practice.. However, the assessment of PD-L1 expression on small tissue specimens needs to be evaluated and the association with other features more thoroughly analyzed.. Methods: This retrospective single center study evaluated the immunohistochemical expression of the SP263 anti-PD-L1 antibody on tissue microarrays (TMA) of 152 surgically resected lung adenocarcinomas, using a 25% positivity threshold.

    Article Title: Sensitive detection of mitochondrial DNA variants for analysis of mitochondrial DNA-enriched extracts from frozen tumor tissue.
    Article Snippet: After capture of the extended primers using streptavidin-coated magnetic beads, a cation-exchange resin was added for cleaning and 10-15 nl of the reaction was transferred to a SpectroCHIP® Array (a silicon chip with pre-spotted matrix crystals) using an RS1000 Nanodispenser (Agena Bioscience).

    Article Title: Mutation analysis in individual circulating tumor cells depicts intratumor heterogeneity in melanoma.
    Article Snippet: Circulating tumor DNA (ctDNA) is the cornerstone of liquid biopsy diagnostics, revealing clinically relevant genomic aberrations from blood of cancer patients.. Genomic analysis of single circulating tumor cells (CTCs) could provide additional insights into intrapatient heterogeneity, but it requires whole-genome amplification (WGA) of DNA, which might introduce bias.. Here, we describe a novel approach based on mass spectrometry for mutation detection from individual CTCs not requiring WGA and complex bioinformatics pipelines.

    Article Title: NeoSeekTM STEC: A Multiplex Molecular Method for Detection and Identification of Select Shiga Toxin-Producing Escherichia coli in Beef.
    Article Snippet: Supplies and Equipment (a) Stomacher® or equivalent. (b) Balance.—2000 g capacity, 0.1 g sensitivity. (c) Incubator.—42 ± 1°C. (d) Heat block.—With insert for 1.5 mL microcentrifuge tubes, 100 ± 4°C. (e) PCR thermocycler. (f ) Microcentrifuge.—12 000 × g. (g) Plate centrifuge.—2000–4000 rpm. (h) Nanodispenser (Agena Bioscience). (i) SpectroCHIP® array.—384-element (Agena Bioscience). (j) Matrix-assisted laser desorption ionization-time-of-flight mass spectrometer.—MassARRAY Analyzer 4 system (Agena Bioscience). (k) PCR plates.—96- and 384-well. (l) Plate sealing film. (m) Microcentrifuge tubes.—1.5 mL. (n) Stomacher-type bags for sample enrichment.—With filters. (o) Serological pipettes.—1–10 mL. (p) Micropipettor and tips.—1–1000 μL. (q) STEC sample shipping kit.—For packaging and shipping samples for testing (Neogen Cat. No. 9287 or equivalent).



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